Unable to update datasource in Bokeh python









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I am using Bokeh 1.0.1. I am unable to update the data source in the Update method i.e src.data.update(new_src.data) doesn't seem to work. Below is the full code.



def modify_doc(doc):

def create_dataset(df, resample='D'):
# Resample the data
src = df.resample(resample).mean()

# Reset index for hovering
src.reset_index(inplace=True)

return ColumnDataSource(src)

def create_plot(src):
# Blank plot with correct labels
p = figure(plot_width=700, plot_height=300, x_axis_type="datetime",
title = 'Variation of Pollution',
x_axis_label = 'Time', y_axis_label = 'Pollution (µg/m³)')

p.line(source=src, x='Date & Time', y='pm2.5', line_width=2,
color='firebrick', line_alpha=0.5, legend='Actual')

hover = HoverTool(tooltips=[('Pollution', '@pm2.5 µg/m³'),
('Air Temp', '@Air Temp. °C'),
('Temp', '(@Min. Temp.0.2f, @Max. Temp.0.2f) °C'),
('Dew Pt.', '@Dew Pt. °C'),
('Rainfall', '@Rainfall mm'),
('Wind Dir.', '@Wind Dir. °'),
('Wind Speed', '@Wind Speed km/hr'),
('Relative humidity', '(@Min. RH0.2f, @Max. RH0.2f) %')],
mode='vline')

p.add_tools(hover)
p.legend.click_policy = 'hide'

return p

# Update function takes three default parameters
def update(attr, old, new):
# Resampling list
re_list = ['D', 'W', 'M', 'A']

# Make a new dataset based on the selected carriers and the
# make_dataset function defined earlier
new_src = create_dataset(df,
resample = re_list[resample_button_group.active])


# Update the source used the quad glpyhs
src.data.update(new_src.data)



resample_button_group = RadioButtonGroup(labels=["Day", "Week", "Month", "Year"], active=1)
resample_button_group.on_change('active', update)

controls = WidgetBox(resample_button_group)

# Initial Plot
src = create_dataset(df)
p = create_plot(src.data)

layout = row(controls, p)
doc.add_root(layout)

# Set up an application
handler = FunctionHandler(modify_doc)
app = Application(handler)









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    up vote
    2
    down vote

    favorite












    I am using Bokeh 1.0.1. I am unable to update the data source in the Update method i.e src.data.update(new_src.data) doesn't seem to work. Below is the full code.



    def modify_doc(doc):

    def create_dataset(df, resample='D'):
    # Resample the data
    src = df.resample(resample).mean()

    # Reset index for hovering
    src.reset_index(inplace=True)

    return ColumnDataSource(src)

    def create_plot(src):
    # Blank plot with correct labels
    p = figure(plot_width=700, plot_height=300, x_axis_type="datetime",
    title = 'Variation of Pollution',
    x_axis_label = 'Time', y_axis_label = 'Pollution (µg/m³)')

    p.line(source=src, x='Date & Time', y='pm2.5', line_width=2,
    color='firebrick', line_alpha=0.5, legend='Actual')

    hover = HoverTool(tooltips=[('Pollution', '@pm2.5 µg/m³'),
    ('Air Temp', '@Air Temp. °C'),
    ('Temp', '(@Min. Temp.0.2f, @Max. Temp.0.2f) °C'),
    ('Dew Pt.', '@Dew Pt. °C'),
    ('Rainfall', '@Rainfall mm'),
    ('Wind Dir.', '@Wind Dir. °'),
    ('Wind Speed', '@Wind Speed km/hr'),
    ('Relative humidity', '(@Min. RH0.2f, @Max. RH0.2f) %')],
    mode='vline')

    p.add_tools(hover)
    p.legend.click_policy = 'hide'

    return p

    # Update function takes three default parameters
    def update(attr, old, new):
    # Resampling list
    re_list = ['D', 'W', 'M', 'A']

    # Make a new dataset based on the selected carriers and the
    # make_dataset function defined earlier
    new_src = create_dataset(df,
    resample = re_list[resample_button_group.active])


    # Update the source used the quad glpyhs
    src.data.update(new_src.data)



    resample_button_group = RadioButtonGroup(labels=["Day", "Week", "Month", "Year"], active=1)
    resample_button_group.on_change('active', update)

    controls = WidgetBox(resample_button_group)

    # Initial Plot
    src = create_dataset(df)
    p = create_plot(src.data)

    layout = row(controls, p)
    doc.add_root(layout)

    # Set up an application
    handler = FunctionHandler(modify_doc)
    app = Application(handler)









    share|improve this question

























      up vote
      2
      down vote

      favorite









      up vote
      2
      down vote

      favorite











      I am using Bokeh 1.0.1. I am unable to update the data source in the Update method i.e src.data.update(new_src.data) doesn't seem to work. Below is the full code.



      def modify_doc(doc):

      def create_dataset(df, resample='D'):
      # Resample the data
      src = df.resample(resample).mean()

      # Reset index for hovering
      src.reset_index(inplace=True)

      return ColumnDataSource(src)

      def create_plot(src):
      # Blank plot with correct labels
      p = figure(plot_width=700, plot_height=300, x_axis_type="datetime",
      title = 'Variation of Pollution',
      x_axis_label = 'Time', y_axis_label = 'Pollution (µg/m³)')

      p.line(source=src, x='Date & Time', y='pm2.5', line_width=2,
      color='firebrick', line_alpha=0.5, legend='Actual')

      hover = HoverTool(tooltips=[('Pollution', '@pm2.5 µg/m³'),
      ('Air Temp', '@Air Temp. °C'),
      ('Temp', '(@Min. Temp.0.2f, @Max. Temp.0.2f) °C'),
      ('Dew Pt.', '@Dew Pt. °C'),
      ('Rainfall', '@Rainfall mm'),
      ('Wind Dir.', '@Wind Dir. °'),
      ('Wind Speed', '@Wind Speed km/hr'),
      ('Relative humidity', '(@Min. RH0.2f, @Max. RH0.2f) %')],
      mode='vline')

      p.add_tools(hover)
      p.legend.click_policy = 'hide'

      return p

      # Update function takes three default parameters
      def update(attr, old, new):
      # Resampling list
      re_list = ['D', 'W', 'M', 'A']

      # Make a new dataset based on the selected carriers and the
      # make_dataset function defined earlier
      new_src = create_dataset(df,
      resample = re_list[resample_button_group.active])


      # Update the source used the quad glpyhs
      src.data.update(new_src.data)



      resample_button_group = RadioButtonGroup(labels=["Day", "Week", "Month", "Year"], active=1)
      resample_button_group.on_change('active', update)

      controls = WidgetBox(resample_button_group)

      # Initial Plot
      src = create_dataset(df)
      p = create_plot(src.data)

      layout = row(controls, p)
      doc.add_root(layout)

      # Set up an application
      handler = FunctionHandler(modify_doc)
      app = Application(handler)









      share|improve this question















      I am using Bokeh 1.0.1. I am unable to update the data source in the Update method i.e src.data.update(new_src.data) doesn't seem to work. Below is the full code.



      def modify_doc(doc):

      def create_dataset(df, resample='D'):
      # Resample the data
      src = df.resample(resample).mean()

      # Reset index for hovering
      src.reset_index(inplace=True)

      return ColumnDataSource(src)

      def create_plot(src):
      # Blank plot with correct labels
      p = figure(plot_width=700, plot_height=300, x_axis_type="datetime",
      title = 'Variation of Pollution',
      x_axis_label = 'Time', y_axis_label = 'Pollution (µg/m³)')

      p.line(source=src, x='Date & Time', y='pm2.5', line_width=2,
      color='firebrick', line_alpha=0.5, legend='Actual')

      hover = HoverTool(tooltips=[('Pollution', '@pm2.5 µg/m³'),
      ('Air Temp', '@Air Temp. °C'),
      ('Temp', '(@Min. Temp.0.2f, @Max. Temp.0.2f) °C'),
      ('Dew Pt.', '@Dew Pt. °C'),
      ('Rainfall', '@Rainfall mm'),
      ('Wind Dir.', '@Wind Dir. °'),
      ('Wind Speed', '@Wind Speed km/hr'),
      ('Relative humidity', '(@Min. RH0.2f, @Max. RH0.2f) %')],
      mode='vline')

      p.add_tools(hover)
      p.legend.click_policy = 'hide'

      return p

      # Update function takes three default parameters
      def update(attr, old, new):
      # Resampling list
      re_list = ['D', 'W', 'M', 'A']

      # Make a new dataset based on the selected carriers and the
      # make_dataset function defined earlier
      new_src = create_dataset(df,
      resample = re_list[resample_button_group.active])


      # Update the source used the quad glpyhs
      src.data.update(new_src.data)



      resample_button_group = RadioButtonGroup(labels=["Day", "Week", "Month", "Year"], active=1)
      resample_button_group.on_change('active', update)

      controls = WidgetBox(resample_button_group)

      # Initial Plot
      src = create_dataset(df)
      p = create_plot(src.data)

      layout = row(controls, p)
      doc.add_root(layout)

      # Set up an application
      handler = FunctionHandler(modify_doc)
      app = Application(handler)






      python pandas bokeh rbokeh bokehjs






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      edited Nov 11 at 10:21

























      asked Nov 11 at 9:47









      Po Xin

      133




      133






















          1 Answer
          1






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          up vote
          0
          down vote



          accepted










          You should be able to update the line glyph directly.



          First, modify your plotting code to assign a name to the line glyph:



          pm_line = p.line(
          source=src,
          x='Date & Time',
          y='pm2.5',
          line_width=2,
          color='firebrick',
          line_alpha=0.5,
          legend='Actual',
          name='pm_line' # Add this!
          )


          Then in your update function, replace your existing update line with the following:



          pm_line = p.select_one('name':'pm_line')
          pm_line.data_source.data = new_src.data





          share|improve this answer




















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            1 Answer
            1






            active

            oldest

            votes








            1 Answer
            1






            active

            oldest

            votes









            active

            oldest

            votes






            active

            oldest

            votes








            up vote
            0
            down vote



            accepted










            You should be able to update the line glyph directly.



            First, modify your plotting code to assign a name to the line glyph:



            pm_line = p.line(
            source=src,
            x='Date & Time',
            y='pm2.5',
            line_width=2,
            color='firebrick',
            line_alpha=0.5,
            legend='Actual',
            name='pm_line' # Add this!
            )


            Then in your update function, replace your existing update line with the following:



            pm_line = p.select_one('name':'pm_line')
            pm_line.data_source.data = new_src.data





            share|improve this answer
























              up vote
              0
              down vote



              accepted










              You should be able to update the line glyph directly.



              First, modify your plotting code to assign a name to the line glyph:



              pm_line = p.line(
              source=src,
              x='Date & Time',
              y='pm2.5',
              line_width=2,
              color='firebrick',
              line_alpha=0.5,
              legend='Actual',
              name='pm_line' # Add this!
              )


              Then in your update function, replace your existing update line with the following:



              pm_line = p.select_one('name':'pm_line')
              pm_line.data_source.data = new_src.data





              share|improve this answer






















                up vote
                0
                down vote



                accepted







                up vote
                0
                down vote



                accepted






                You should be able to update the line glyph directly.



                First, modify your plotting code to assign a name to the line glyph:



                pm_line = p.line(
                source=src,
                x='Date & Time',
                y='pm2.5',
                line_width=2,
                color='firebrick',
                line_alpha=0.5,
                legend='Actual',
                name='pm_line' # Add this!
                )


                Then in your update function, replace your existing update line with the following:



                pm_line = p.select_one('name':'pm_line')
                pm_line.data_source.data = new_src.data





                share|improve this answer












                You should be able to update the line glyph directly.



                First, modify your plotting code to assign a name to the line glyph:



                pm_line = p.line(
                source=src,
                x='Date & Time',
                y='pm2.5',
                line_width=2,
                color='firebrick',
                line_alpha=0.5,
                legend='Actual',
                name='pm_line' # Add this!
                )


                Then in your update function, replace your existing update line with the following:



                pm_line = p.select_one('name':'pm_line')
                pm_line.data_source.data = new_src.data






                share|improve this answer












                share|improve this answer



                share|improve this answer










                answered Nov 11 at 19:55









                PJW

                616725




                616725



























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