Can't apply transfer function with output from vtkJPEGReader? (vtk - Activiz.net )
up vote
0
down vote
favorite
I am using VTK with Activiz.net to reconstruct a JPEG ultrasound series, I have used raycasting technique and applied transfer function as here,
The problem is that the Opacity transfer function isn't working with the vtkJPEG reader output, the black regions were not filtered, the code is working fine with vtkDICOMReader? so, any solutions for this ???
The code:
vtkJPEGReader jpegReader = vtkJPEGReader.New();
jpegReader.SetDataByteOrderToLittleEndian();
jpegReader.SetFilePattern("%s%d.jpg");
jpegReader.SetFilePrefix(@"C:UsersDolaDesktoptestTestC#SeriesFrame_001");
jpegReader.SetDataExtent(0, Width, 0, Length,1, numberOfFrames);
jpegReader.SetDataScalarTypeToFloat();
jpegReader.SetDataSpacing(1, 1, 1);
jpegReader.SetDataOrigin(0, 0, 0);
vtkImageThreshold SelectTissue = vtkImageThreshold.New();
SelectTissue.SetInput(jpegReader.GetOutput());
SelectTissue.ThresholdBetween(0, 10);
vtkFixedPointVolumeRayCastMapper volumeMapper = vtkFixedPointVolumeRayCastMapper.New();
volumeMapper.SetInput(SelectTissue.GetOutput());
vtkColorTransferFunction volumeColor = vtkColorTransferFunction.New();
volumeColor.AddRGBPoint(1, 1, 0, 0);
volumeColor.AddRGBPoint(100, 1, 0, 0.4);
volumeColor.AddRGBPoint(160, 1.0, 0.5, 0.1);
volumeColor.AddRGBPoint(255, 1.0, 0.5, 0.1);
vtkPiecewiseFunction volumeScalarOpacity = vtkPiecewiseFunction.New();
volumeScalarOpacity.AddPoint(0, 0.00);
volumeScalarOpacity.AddPoint(20, 0.00);
volumeScalarOpacity.AddPoint(30, 0.20);
volumeScalarOpacity.AddPoint(100, 0.7);
vtkPiecewiseFunction volumeGradientOpacity = vtkPiecewiseFunction.New();
volumeGradientOpacity.AddPoint(0, 1.0);
volumeGradientOpacity.AddPoint(255, 1.0);
vtkVolumeProperty volumeProperty = vtkVolumeProperty.New();
volumeProperty.SetColor(volumeColor);
volumeProperty.SetScalarOpacity(volumeScalarOpacity);
volumeProperty.SetGradientOpacity(volumeGradientOpacity);
volumeProperty.SetInterpolationTypeToLinear();
volumeProperty.ShadeOn();
volumeProperty.SetAmbient(0.1);
volumeProperty.SetDiffuse(0.9);
volumeProperty.SetSpecular(0.2);
vtkVolume volume = vtkVolume.New();
volume.SetMapper(volumeMapper);
volume.SetProperty(volumeProperty);
vtkRenderWindow renderWindow = renderWindowControl1.RenderWindow;
vtkRenderer renderer = renderWindow.GetRenderers().GetFirstRenderer();
renderer.AddViewProp(volume);
renderer.SetBackground(0.2, 0.3, 0.4);
c# vtk volume-rendering
add a comment |
up vote
0
down vote
favorite
I am using VTK with Activiz.net to reconstruct a JPEG ultrasound series, I have used raycasting technique and applied transfer function as here,
The problem is that the Opacity transfer function isn't working with the vtkJPEG reader output, the black regions were not filtered, the code is working fine with vtkDICOMReader? so, any solutions for this ???
The code:
vtkJPEGReader jpegReader = vtkJPEGReader.New();
jpegReader.SetDataByteOrderToLittleEndian();
jpegReader.SetFilePattern("%s%d.jpg");
jpegReader.SetFilePrefix(@"C:UsersDolaDesktoptestTestC#SeriesFrame_001");
jpegReader.SetDataExtent(0, Width, 0, Length,1, numberOfFrames);
jpegReader.SetDataScalarTypeToFloat();
jpegReader.SetDataSpacing(1, 1, 1);
jpegReader.SetDataOrigin(0, 0, 0);
vtkImageThreshold SelectTissue = vtkImageThreshold.New();
SelectTissue.SetInput(jpegReader.GetOutput());
SelectTissue.ThresholdBetween(0, 10);
vtkFixedPointVolumeRayCastMapper volumeMapper = vtkFixedPointVolumeRayCastMapper.New();
volumeMapper.SetInput(SelectTissue.GetOutput());
vtkColorTransferFunction volumeColor = vtkColorTransferFunction.New();
volumeColor.AddRGBPoint(1, 1, 0, 0);
volumeColor.AddRGBPoint(100, 1, 0, 0.4);
volumeColor.AddRGBPoint(160, 1.0, 0.5, 0.1);
volumeColor.AddRGBPoint(255, 1.0, 0.5, 0.1);
vtkPiecewiseFunction volumeScalarOpacity = vtkPiecewiseFunction.New();
volumeScalarOpacity.AddPoint(0, 0.00);
volumeScalarOpacity.AddPoint(20, 0.00);
volumeScalarOpacity.AddPoint(30, 0.20);
volumeScalarOpacity.AddPoint(100, 0.7);
vtkPiecewiseFunction volumeGradientOpacity = vtkPiecewiseFunction.New();
volumeGradientOpacity.AddPoint(0, 1.0);
volumeGradientOpacity.AddPoint(255, 1.0);
vtkVolumeProperty volumeProperty = vtkVolumeProperty.New();
volumeProperty.SetColor(volumeColor);
volumeProperty.SetScalarOpacity(volumeScalarOpacity);
volumeProperty.SetGradientOpacity(volumeGradientOpacity);
volumeProperty.SetInterpolationTypeToLinear();
volumeProperty.ShadeOn();
volumeProperty.SetAmbient(0.1);
volumeProperty.SetDiffuse(0.9);
volumeProperty.SetSpecular(0.2);
vtkVolume volume = vtkVolume.New();
volume.SetMapper(volumeMapper);
volume.SetProperty(volumeProperty);
vtkRenderWindow renderWindow = renderWindowControl1.RenderWindow;
vtkRenderer renderer = renderWindow.GetRenderers().GetFirstRenderer();
renderer.AddViewProp(volume);
renderer.SetBackground(0.2, 0.3, 0.4);
c# vtk volume-rendering
add a comment |
up vote
0
down vote
favorite
up vote
0
down vote
favorite
I am using VTK with Activiz.net to reconstruct a JPEG ultrasound series, I have used raycasting technique and applied transfer function as here,
The problem is that the Opacity transfer function isn't working with the vtkJPEG reader output, the black regions were not filtered, the code is working fine with vtkDICOMReader? so, any solutions for this ???
The code:
vtkJPEGReader jpegReader = vtkJPEGReader.New();
jpegReader.SetDataByteOrderToLittleEndian();
jpegReader.SetFilePattern("%s%d.jpg");
jpegReader.SetFilePrefix(@"C:UsersDolaDesktoptestTestC#SeriesFrame_001");
jpegReader.SetDataExtent(0, Width, 0, Length,1, numberOfFrames);
jpegReader.SetDataScalarTypeToFloat();
jpegReader.SetDataSpacing(1, 1, 1);
jpegReader.SetDataOrigin(0, 0, 0);
vtkImageThreshold SelectTissue = vtkImageThreshold.New();
SelectTissue.SetInput(jpegReader.GetOutput());
SelectTissue.ThresholdBetween(0, 10);
vtkFixedPointVolumeRayCastMapper volumeMapper = vtkFixedPointVolumeRayCastMapper.New();
volumeMapper.SetInput(SelectTissue.GetOutput());
vtkColorTransferFunction volumeColor = vtkColorTransferFunction.New();
volumeColor.AddRGBPoint(1, 1, 0, 0);
volumeColor.AddRGBPoint(100, 1, 0, 0.4);
volumeColor.AddRGBPoint(160, 1.0, 0.5, 0.1);
volumeColor.AddRGBPoint(255, 1.0, 0.5, 0.1);
vtkPiecewiseFunction volumeScalarOpacity = vtkPiecewiseFunction.New();
volumeScalarOpacity.AddPoint(0, 0.00);
volumeScalarOpacity.AddPoint(20, 0.00);
volumeScalarOpacity.AddPoint(30, 0.20);
volumeScalarOpacity.AddPoint(100, 0.7);
vtkPiecewiseFunction volumeGradientOpacity = vtkPiecewiseFunction.New();
volumeGradientOpacity.AddPoint(0, 1.0);
volumeGradientOpacity.AddPoint(255, 1.0);
vtkVolumeProperty volumeProperty = vtkVolumeProperty.New();
volumeProperty.SetColor(volumeColor);
volumeProperty.SetScalarOpacity(volumeScalarOpacity);
volumeProperty.SetGradientOpacity(volumeGradientOpacity);
volumeProperty.SetInterpolationTypeToLinear();
volumeProperty.ShadeOn();
volumeProperty.SetAmbient(0.1);
volumeProperty.SetDiffuse(0.9);
volumeProperty.SetSpecular(0.2);
vtkVolume volume = vtkVolume.New();
volume.SetMapper(volumeMapper);
volume.SetProperty(volumeProperty);
vtkRenderWindow renderWindow = renderWindowControl1.RenderWindow;
vtkRenderer renderer = renderWindow.GetRenderers().GetFirstRenderer();
renderer.AddViewProp(volume);
renderer.SetBackground(0.2, 0.3, 0.4);
c# vtk volume-rendering
I am using VTK with Activiz.net to reconstruct a JPEG ultrasound series, I have used raycasting technique and applied transfer function as here,
The problem is that the Opacity transfer function isn't working with the vtkJPEG reader output, the black regions were not filtered, the code is working fine with vtkDICOMReader? so, any solutions for this ???
The code:
vtkJPEGReader jpegReader = vtkJPEGReader.New();
jpegReader.SetDataByteOrderToLittleEndian();
jpegReader.SetFilePattern("%s%d.jpg");
jpegReader.SetFilePrefix(@"C:UsersDolaDesktoptestTestC#SeriesFrame_001");
jpegReader.SetDataExtent(0, Width, 0, Length,1, numberOfFrames);
jpegReader.SetDataScalarTypeToFloat();
jpegReader.SetDataSpacing(1, 1, 1);
jpegReader.SetDataOrigin(0, 0, 0);
vtkImageThreshold SelectTissue = vtkImageThreshold.New();
SelectTissue.SetInput(jpegReader.GetOutput());
SelectTissue.ThresholdBetween(0, 10);
vtkFixedPointVolumeRayCastMapper volumeMapper = vtkFixedPointVolumeRayCastMapper.New();
volumeMapper.SetInput(SelectTissue.GetOutput());
vtkColorTransferFunction volumeColor = vtkColorTransferFunction.New();
volumeColor.AddRGBPoint(1, 1, 0, 0);
volumeColor.AddRGBPoint(100, 1, 0, 0.4);
volumeColor.AddRGBPoint(160, 1.0, 0.5, 0.1);
volumeColor.AddRGBPoint(255, 1.0, 0.5, 0.1);
vtkPiecewiseFunction volumeScalarOpacity = vtkPiecewiseFunction.New();
volumeScalarOpacity.AddPoint(0, 0.00);
volumeScalarOpacity.AddPoint(20, 0.00);
volumeScalarOpacity.AddPoint(30, 0.20);
volumeScalarOpacity.AddPoint(100, 0.7);
vtkPiecewiseFunction volumeGradientOpacity = vtkPiecewiseFunction.New();
volumeGradientOpacity.AddPoint(0, 1.0);
volumeGradientOpacity.AddPoint(255, 1.0);
vtkVolumeProperty volumeProperty = vtkVolumeProperty.New();
volumeProperty.SetColor(volumeColor);
volumeProperty.SetScalarOpacity(volumeScalarOpacity);
volumeProperty.SetGradientOpacity(volumeGradientOpacity);
volumeProperty.SetInterpolationTypeToLinear();
volumeProperty.ShadeOn();
volumeProperty.SetAmbient(0.1);
volumeProperty.SetDiffuse(0.9);
volumeProperty.SetSpecular(0.2);
vtkVolume volume = vtkVolume.New();
volume.SetMapper(volumeMapper);
volume.SetProperty(volumeProperty);
vtkRenderWindow renderWindow = renderWindowControl1.RenderWindow;
vtkRenderer renderer = renderWindow.GetRenderers().GetFirstRenderer();
renderer.AddViewProp(volume);
renderer.SetBackground(0.2, 0.3, 0.4);
c# vtk volume-rendering
c# vtk volume-rendering
edited Nov 11 at 12:19
asked Nov 11 at 10:35
Walter White
12
12
add a comment |
add a comment |
active
oldest
votes
active
oldest
votes
active
oldest
votes
active
oldest
votes
active
oldest
votes
Thanks for contributing an answer to Stack Overflow!
- Please be sure to answer the question. Provide details and share your research!
But avoid …
- Asking for help, clarification, or responding to other answers.
- Making statements based on opinion; back them up with references or personal experience.
To learn more, see our tips on writing great answers.
Some of your past answers have not been well-received, and you're in danger of being blocked from answering.
Please pay close attention to the following guidance:
- Please be sure to answer the question. Provide details and share your research!
But avoid …
- Asking for help, clarification, or responding to other answers.
- Making statements based on opinion; back them up with references or personal experience.
To learn more, see our tips on writing great answers.
Sign up or log in
StackExchange.ready(function ()
StackExchange.helpers.onClickDraftSave('#login-link');
);
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
StackExchange.ready(
function ()
StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fstackoverflow.com%2fquestions%2f53247890%2fcant-apply-transfer-function-with-output-from-vtkjpegreader-vtk-activiz-net%23new-answer', 'question_page');
);
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function ()
StackExchange.helpers.onClickDraftSave('#login-link');
);
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function ()
StackExchange.helpers.onClickDraftSave('#login-link');
);
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function ()
StackExchange.helpers.onClickDraftSave('#login-link');
);
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown